Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Gm12895-201ENSMUST00000122214 226 ntBASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Ccdc38Q8CDN8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc38Q8CDN8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc38Q8CDN8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc38Q8CDN8 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ccdc38Q8CDN8 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.14■□□□□ 0.33
Ccdc38Q8CDN8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Gm8344-201ENSMUST00000119813 856 ntBASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ccdc38Q8CDN8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc38Q8CDN8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc38Q8CDN8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms