Protein–RNA interactions for Protein: Q8CDE8

Spdye4b, 4933411G11Rik protein, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spdye4bQ8CDE8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Spdye4bQ8CDE8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Gm15590-201ENSMUST00000078419 552 ntBASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Spdye4bQ8CDE8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Spdye4bQ8CDE8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Gm45167-201ENSMUST00000208007 322 ntBASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Spdye4bQ8CDE8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
Spdye4bQ8CDE8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Spdye4bQ8CDE8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms