Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Lysmd4Q8CC84 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lysmd4Q8CC84 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lysmd4Q8CC84 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lysmd4Q8CC84 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lysmd4Q8CC84 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Gm14722-201ENSMUST00000118943 689 ntBASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lysmd4Q8CC84 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lysmd4Q8CC84 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Lysmd4Q8CC84 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms