Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsfm13Q8BXS2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsfm13Q8BXS2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsfm13Q8BXS2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Gm7977-201ENSMUST00000193787 748 ntBASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.78□□□□□ -0.2
Tnfsfm13Q8BXS2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfsfm13Q8BXS2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfsfm13Q8BXS2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms