Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdhr3Q8BL00 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm8825-201ENSMUST00000182565 998 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm4518-201ENSMUST00000182638 718 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdhr3Q8BL00 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Efs-202ENSMUST00000227037 2540 ntBASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.46□□□□□ -0.26
Cdhr3Q8BL00 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cdhr3Q8BL00 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms