Protein–RNA interactions for Protein: Q8BKI2

Tnrc6b, Trinucleotide repeat-containing gene 6B protein, mousemouse

Known RBP Predictions only

Length 1,810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6bQ8BKI2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.18■□□□□ 0.82
Tnrc6bQ8BKI2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Gm5049-201ENSMUST00000195878 1590 ntBASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
Tnrc6bQ8BKI2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Gm5566-201ENSMUST00000116118 459 ntBASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tnrc6bQ8BKI2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Asic1-205ENSMUST00000228185 1818 ntBASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Gm16215-201ENSMUST00000161990 637 ntBASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnrc6bQ8BKI2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Tnrc6bQ8BKI2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 AC149588.3-201ENSMUST00000227515 150 ntBASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnrc6bQ8BKI2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Gm3365-201ENSMUST00000216296 1480 ntBASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Gm13464-201ENSMUST00000119418 935 ntBASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.13■□□□□ 0.81
Tnrc6bQ8BKI2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnrc6bQ8BKI2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms