Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Trnp1Q80ZI1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Gm15321-201ENSMUST00000121290 288 ntBASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Gm43433-201ENSMUST00000196573 481 ntBASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 AC130829.1-201ENSMUST00000221548 494 ntBASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trnp1Q80ZI1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trnp1Q80ZI1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trnp1Q80ZI1 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.27■□□□□ 0.35
Trnp1Q80ZI1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trnp1Q80ZI1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trnp1Q80ZI1 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Gm24694-201ENSMUST00000180054 110 ntBASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Gm27663-201ENSMUST00000184839 110 ntBASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trnp1Q80ZI1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Gm14928-201ENSMUST00000120198 477 ntBASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trnp1Q80ZI1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trnp1Q80ZI1 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trnp1Q80ZI1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trnp1Q80ZI1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms