Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Prob1-201ENSMUST00000097619 3021 ntBASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Prpf40bQ80W14 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Gm17968-201ENSMUST00000194902 784 ntBASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Prpf40bQ80W14 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Prpf40bQ80W14 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.74■□□□□ 0.43
Prpf40bQ80W14 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm37153-201ENSMUST00000193637 231 ntBASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm44335-201ENSMUST00000196879 141 ntBASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm44297-201ENSMUST00000198304 141 ntBASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm44346-201ENSMUST00000198851 141 ntBASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Prpf40bQ80W14 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms