Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ush1gQ80T11 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ush1gQ80T11 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ush1gQ80T11 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Mir6956-201ENSMUST00000183598 62 ntBASIC16.84■□□□□ 0.29
Ush1gQ80T11 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Gm9682-201ENSMUST00000197505 556 ntBASIC16.84■□□□□ 0.29
Ush1gQ80T11 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.84■□□□□ 0.29
Ush1gQ80T11 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ush1gQ80T11 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ush1gQ80T11 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Ush1gQ80T11 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ush1gQ80T11 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Gm19164-201ENSMUST00000210667 640 ntBASIC16.83■□□□□ 0.28
Ush1gQ80T11 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.83■□□□□ 0.28
Ush1gQ80T11 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ush1gQ80T11 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.81■□□□□ 0.28
Ush1gQ80T11 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.81■□□□□ 0.28
Ush1gQ80T11 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms