Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Dhx40Q6PE54 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Dhx40Q6PE54 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.14■□□□□ 0.34
Dhx40Q6PE54 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Gm25016-201ENSMUST00000158399 131 ntBASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Dhx40Q6PE54 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Dhx40Q6PE54 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Gm15794-201ENSMUST00000120182 631 ntBASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Dhx40Q6PE54 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Dhx40Q6PE54 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms