Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Snrnp40Q6PE01 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Snrnp40Q6PE01 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Gm27306-201ENSMUST00000183970 107 ntBASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.52□□□□□ -0.25
Snrnp40Q6PE01 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gm11543-201ENSMUST00000120758 370 ntBASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Mir8102-201ENSMUST00000184148 139 ntBASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gm27989-201ENSMUST00000184721 107 ntBASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Snrnp40Q6PE01 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gm2810-201ENSMUST00000118681 990 ntBASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gm18737-201ENSMUST00000173594 937 ntBASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gm38294-201ENSMUST00000192831 381 ntBASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Snrnp40Q6PE01 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms