Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Herc4Q6PAV2 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gm25990-201ENSMUST00000102440 86 ntBASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gm6089-201ENSMUST00000197666 938 ntBASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gm5864-201ENSMUST00000202263 970 ntBASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Herc4Q6PAV2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Herc4Q6PAV2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Herc4Q6PAV2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herc4Q6PAV2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Herc4Q6PAV2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.02■□□□□ 0.31
Herc4Q6PAV2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Mir8098-201ENSMUST00000184011 137 ntBASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Herc4Q6PAV2 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms