Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Hmgb4Q6P8W9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Gm45167-201ENSMUST00000208007 322 ntBASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Hmgb4Q6P8W9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Hmgb4Q6P8W9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Hmgb4Q6P8W9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms