Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ctnna3Q65CL1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ctnna3Q65CL1 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ctnna3Q65CL1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Gm23935-201ENSMUST00000102303 57 ntBASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Gm24270-201ENSMUST00000102326 57 ntBASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Gm24245-201ENSMUST00000157318 57 ntBASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ctnna3Q65CL1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm12497-201ENSMUST00000138778 237 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm8825-201ENSMUST00000182565 998 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm4518-201ENSMUST00000182638 718 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.32■□□□□ 0.36
Ctnna3Q65CL1 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms