Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.13■□□□□ 0.65
Irf9Q61179 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Irf9Q61179 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Irf9Q61179 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.12■□□□□ 0.65
Irf9Q61179 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Irf9Q61179 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Irf9Q61179 Gm45612-201ENSMUST00000211320 160 ntBASIC19.12■□□□□ 0.65
Irf9Q61179 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.12■□□□□ 0.65
Irf9Q61179 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Irf9Q61179 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Irf9Q61179 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Irf9Q61179 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Irf9Q61179 Gm20553-201ENSMUST00000204205 844 ntBASIC19.11■□□□□ 0.65
Irf9Q61179 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Irf9Q61179 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC19.11■□□□□ 0.65
Irf9Q61179 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Irf9Q61179 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.11■□□□□ 0.65
Irf9Q61179 Dancr-204ENSMUST00000132389 2347 ntBASIC19.11■□□□□ 0.65
Irf9Q61179 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.1■□□□□ 0.65
Irf9Q61179 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Irf9Q61179 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Irf9Q61179 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Irf9Q61179 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Irf9Q61179 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.1■□□□□ 0.65
Irf9Q61179 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Gm27494-201ENSMUST00000184735 189 ntBASIC19.1■□□□□ 0.65
Irf9Q61179 Gm2272-201ENSMUST00000194903 582 ntBASIC19.1■□□□□ 0.65
Irf9Q61179 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.1■□□□□ 0.65
Irf9Q61179 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.1■□□□□ 0.65
Irf9Q61179 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Irf9Q61179 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Irf9Q61179 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.09■□□□□ 0.65
Irf9Q61179 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Irf9Q61179 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC19.09■□□□□ 0.65
Irf9Q61179 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Irf9Q61179 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Irf9Q61179 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.09■□□□□ 0.65
Irf9Q61179 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Irf9Q61179 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Irf9Q61179 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Irf9Q61179 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.08■□□□□ 0.65
Irf9Q61179 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.08■□□□□ 0.65
Irf9Q61179 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Irf9Q61179 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
Irf9Q61179 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Irf9Q61179 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.08■□□□□ 0.64
Irf9Q61179 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Rpph1-201ENSMUST00000175096 319 ntBASIC19.08■□□□□ 0.64
Irf9Q61179 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.08■□□□□ 0.64
Irf9Q61179 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC19.08■□□□□ 0.64
Irf9Q61179 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Irf9Q61179 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Irf9Q61179 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.08■□□□□ 0.64
Irf9Q61179 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Irf9Q61179 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms