Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trav6d-4Q5R1I0 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Prob1-201ENSMUST00000097619 3021 ntBASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-4Q5R1I0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-4Q5R1I0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav6d-4Q5R1I0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms