Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav5d-4Q5R1F6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav5d-4Q5R1F6 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Gm18622-201ENSMUST00000219361 595 ntBASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav5d-4Q5R1F6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 BC037039-201ENSMUST00000192003 2205 ntBASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.27□□□□□ -0.28
Trav5d-4Q5R1F6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gm12644-201ENSMUST00000119935 606 ntBASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gm12497-201ENSMUST00000138778 237 ntBASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gm18669-201ENSMUST00000216049 778 ntBASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav5d-4Q5R1F6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav5d-4Q5R1F6 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms