Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trav6-3Q5R1E6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gm15165-201ENSMUST00000118140 502 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6-3Q5R1E6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Gm12497-201ENSMUST00000138778 237 ntBASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6-3Q5R1E6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav6-3Q5R1E6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms