Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Gm10499-201ENSMUST00000174094 934 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Mir3547-201ENSMUST00000175461 88 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 AC135669.1-201ENSMUST00000213585 412 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Gm5628-201ENSMUST00000222318 1049 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim41Q5NCC3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Gpr146-202ENSMUST00000053120 1040 ntBASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC26.62■■□□□ 1.85
Trim41Q5NCC3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Gm18062-201ENSMUST00000208020 547 ntBASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Gm18055-201ENSMUST00000208254 547 ntBASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim41Q5NCC3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Gm15163-201ENSMUST00000120749 1302 ntBASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Trim41Q5NCC3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Gm27989-201ENSMUST00000184721 107 ntBASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim41Q5NCC3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Gm13410-201ENSMUST00000117058 1415 ntBASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Gm18889-201ENSMUST00000174284 929 ntBASIC26.58■■□□□ 1.85
Trim41Q5NCC3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Trim41Q5NCC3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
Trim41Q5NCC3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms