Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Prune2Q52KR3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Prune2Q52KR3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Prune2Q52KR3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Prune2Q52KR3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Gm6257-201ENSMUST00000163864 910 ntBASIC14.27□□□□□ -0.13
Prune2Q52KR3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Prune2Q52KR3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.26□□□□□ -0.13
Prune2Q52KR3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.26□□□□□ -0.13
Prune2Q52KR3 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.26□□□□□ -0.13
Prune2Q52KR3 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Gm5566-201ENSMUST00000116118 459 ntBASIC14.26□□□□□ -0.13
Prune2Q52KR3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Prune2Q52KR3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.25□□□□□ -0.13
Prune2Q52KR3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.25□□□□□ -0.13
Prune2Q52KR3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Prune2Q52KR3 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.25□□□□□ -0.13
Prune2Q52KR3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.24□□□□□ -0.13
Prune2Q52KR3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Prune2Q52KR3 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms