Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Gm13015-201ENSMUST00000118674 204 ntBASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.43■□□□□ 0.06
Fam196aQ3USH1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Fam196aQ3USH1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Gm24694-201ENSMUST00000180054 110 ntBASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Gm27663-201ENSMUST00000184839 110 ntBASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Fam196aQ3USH1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm13829-201ENSMUST00000119600 138 ntBASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm12138-201ENSMUST00000122180 951 ntBASIC15.41■□□□□ 0.06
Fam196aQ3USH1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm10499-201ENSMUST00000174094 934 ntBASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.41■□□□□ 0.06
Fam196aQ3USH1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.4■□□□□ 0.06
Fam196aQ3USH1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Gm27533-201ENSMUST00000183800 152 ntBASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Fam196aQ3USH1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Fam196aQ3USH1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms