Protein–RNA interactions for Protein: Q3U0I6

Smim6, MCG148180, mousemouse

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim6Q3U0I6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12□□□□□ -0.49
Smim6Q3U0I6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smim6Q3U0I6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim6Q3U0I6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Smim6Q3U0I6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.98□□□□□ -0.49
Smim6Q3U0I6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smim6Q3U0I6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms