Protein–RNA interactions for Protein: Q30KN1

Defb47, Beta-defensin 41, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb47Q30KN1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Defb47Q30KN1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Matn2-206ENSMUST00000228570 2798 ntBASIC10.43□□□□□ -0.74
Defb47Q30KN1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.43□□□□□ -0.74
Defb47Q30KN1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Defb47Q30KN1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Gm45417-201ENSMUST00000209533 758 ntBASIC10.42□□□□□ -0.74
Defb47Q30KN1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Defb47Q30KN1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms