Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Gm6659-201ENSMUST00000174752 547 ntBASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.94□□□□□ -0.02
Ptchd3Q0EEE2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Gm6345-202ENSMUST00000180900 204 ntBASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ptchd3Q0EEE2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Efs-202ENSMUST00000227037 2540 ntBASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ptchd3Q0EEE2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 AA414768-201ENSMUST00000121924 1257 ntBASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.91□□□□□ -0.02
Ptchd3Q0EEE2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms