Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm8655-201ENSMUST00000221159 852 ntBASIC14.68□□□□□ -0.06
Atf4Q06507 Chchd1-203ENSMUST00000224633 557 ntBASIC14.68□□□□□ -0.06
Atf4Q06507 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atf4Q06507 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.68□□□□□ -0.06
Atf4Q06507 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Atf4Q06507 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atf4Q06507 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Atf4Q06507 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Atf4Q06507 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.67□□□□□ -0.06
Atf4Q06507 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.67□□□□□ -0.06
Atf4Q06507 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.67□□□□□ -0.06
Atf4Q06507 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.67□□□□□ -0.06
Atf4Q06507 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.67□□□□□ -0.06
Atf4Q06507 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Atf4Q06507 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.67□□□□□ -0.06
Atf4Q06507 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Atf4Q06507 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atf4Q06507 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.66□□□□□ -0.06
Atf4Q06507 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Gm14057-201ENSMUST00000120631 482 ntBASIC14.66□□□□□ -0.06
Atf4Q06507 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Gm28745-201ENSMUST00000190069 305 ntBASIC14.66□□□□□ -0.06
Atf4Q06507 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Atf4Q06507 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC14.66□□□□□ -0.06
Atf4Q06507 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atf4Q06507 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Atf4Q06507 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atf4Q06507 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atf4Q06507 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.65□□□□□ -0.06
Atf4Q06507 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC14.65□□□□□ -0.06
Atf4Q06507 Gm45359-201ENSMUST00000210635 427 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Gm9172-201ENSMUST00000212092 954 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Atf4Q06507 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Atf4Q06507 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.65□□□□□ -0.06
Atf4Q06507 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Atf4Q06507 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Atf4Q06507 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Atf4Q06507 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms