Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.98□□□□□ -0.33
Npas1P97459 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.98□□□□□ -0.33
Npas1P97459 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.98□□□□□ -0.33
Npas1P97459 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.98□□□□□ -0.33
Npas1P97459 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.98□□□□□ -0.33
Npas1P97459 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Npas1P97459 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Npas1P97459 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Npas1P97459 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Npas1P97459 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Npas1P97459 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.97□□□□□ -0.33
Npas1P97459 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Npas1P97459 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.97□□□□□ -0.33
Npas1P97459 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.97□□□□□ -0.33
Npas1P97459 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Gm10566-201ENSMUST00000086739 996 ntBASIC12.97□□□□□ -0.33
Npas1P97459 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Npas1P97459 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.97□□□□□ -0.33
Npas1P97459 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Npas1P97459 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.97□□□□□ -0.33
Npas1P97459 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Npas1P97459 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Npas1P97459 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Npas1P97459 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Npas1P97459 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Gm13168-201ENSMUST00000121771 632 ntBASIC12.96□□□□□ -0.33
Npas1P97459 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.96□□□□□ -0.33
Npas1P97459 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.96□□□□□ -0.33
Npas1P97459 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Npas1P97459 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.96□□□□□ -0.33
Npas1P97459 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Npas1P97459 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.96□□□□□ -0.34
Npas1P97459 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Npas1P97459 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Npas1P97459 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.95□□□□□ -0.34
Npas1P97459 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Npas1P97459 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Gm29257-201ENSMUST00000186115 639 ntBASIC12.95□□□□□ -0.34
Npas1P97459 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Npas1P97459 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Npas1P97459 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.95□□□□□ -0.34
Npas1P97459 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms