Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.45□□□□□ -0.1
Six5P70178 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Six5P70178 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.45□□□□□ -0.1
Six5P70178 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Six5P70178 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.45□□□□□ -0.1
Six5P70178 Mir8098-201ENSMUST00000184011 137 ntBASIC14.45□□□□□ -0.1
Six5P70178 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.45□□□□□ -0.1
Six5P70178 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
Six5P70178 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Six5P70178 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.44□□□□□ -0.1
Six5P70178 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Six5P70178 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Six5P70178 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Six5P70178 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.44□□□□□ -0.1
Six5P70178 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.44□□□□□ -0.1
Six5P70178 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.44□□□□□ -0.1
Six5P70178 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Six5P70178 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Six5P70178 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.44□□□□□ -0.1
Six5P70178 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Six5P70178 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Six5P70178 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.43□□□□□ -0.1
Six5P70178 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.43□□□□□ -0.1
Six5P70178 Gm7230-201ENSMUST00000173026 815 ntBASIC14.43□□□□□ -0.1
Six5P70178 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.43□□□□□ -0.1
Six5P70178 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.43□□□□□ -0.1
Six5P70178 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Six5P70178 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Six5P70178 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Six5P70178 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six5P70178 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six5P70178 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Six5P70178 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.42□□□□□ -0.1
Six5P70178 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six5P70178 Gm7222-201ENSMUST00000117512 906 ntBASIC14.42□□□□□ -0.1
Six5P70178 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms