Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Crnkl1P63154 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.3■□□□□ 0.04
Crnkl1P63154 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.3■□□□□ 0.04
Crnkl1P63154 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.3■□□□□ 0.04
Crnkl1P63154 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Crnkl1P63154 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Crnkl1P63154 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Crnkl1P63154 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Crnkl1P63154 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.29■□□□□ 0.04
Crnkl1P63154 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Crnkl1P63154 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Crnkl1P63154 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Crnkl1P63154 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Crnkl1P63154 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.28■□□□□ 0.04
Crnkl1P63154 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Crnkl1P63154 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Crnkl1P63154 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.28■□□□□ 0.04
Crnkl1P63154 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Crnkl1P63154 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Crnkl1P63154 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Crnkl1P63154 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.27■□□□□ 0.04
Crnkl1P63154 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.27■□□□□ 0.04
Crnkl1P63154 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.27■□□□□ 0.04
Crnkl1P63154 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Crnkl1P63154 Gm18101-201ENSMUST00000215769 548 ntBASIC15.27■□□□□ 0.04
Crnkl1P63154 Gm7370-201ENSMUST00000219471 767 ntBASIC15.27■□□□□ 0.04
Crnkl1P63154 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Crnkl1P63154 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms