Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lhx1P63006 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx1P63006 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx1P63006 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Lhx1P63006 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Lhx1P63006 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Lhx1P63006 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lhx1P63006 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.12■□□□□ 0.01
Lhx1P63006 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Lhx1P63006 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lhx1P63006 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx1P63006 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Lhx1P63006 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.12■□□□□ 0.01
Lhx1P63006 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lhx1P63006 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lhx1P63006 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Mir3113-201ENSMUST00000175478 76 ntBASIC15.11■□□□□ 0.01
Lhx1P63006 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.11■□□□□ 0.01
Lhx1P63006 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.11■□□□□ 0.01
Lhx1P63006 Gm18246-201ENSMUST00000221023 728 ntBASIC15.11■□□□□ 0.01
Lhx1P63006 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Lhx1P63006 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx1P63006 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.11■□□□□ 0.01
Lhx1P63006 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.1■□□□□ 0.01
Lhx1P63006 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.1■□□□□ 0.01
Lhx1P63006 Gm10499-201ENSMUST00000174094 934 ntBASIC15.1■□□□□ 0.01
Lhx1P63006 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.1■□□□□ 0.01
Lhx1P63006 Gm37935-201ENSMUST00000192012 982 ntBASIC15.1■□□□□ 0.01
Lhx1P63006 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Lhx1P63006 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Lhx1P63006 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.1■□□□□ 0.01
Lhx1P63006 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx1P63006 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms