Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm3P62311 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm3P62311 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm3P62311 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Gm26571-201ENSMUST00000181399 666 ntBASIC14.13□□□□□ -0.15
Lsm3P62311 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.13□□□□□ -0.15
Lsm3P62311 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Lsm3P62311 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.13□□□□□ -0.15
Lsm3P62311 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Lsm3P62311 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Lsm3P62311 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.12□□□□□ -0.15
Lsm3P62311 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
Lsm3P62311 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lsm3P62311 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Lsm3P62311 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm3P62311 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Lsm3P62311 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
Lsm3P62311 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Lsm3P62311 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.11□□□□□ -0.15
Lsm3P62311 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.11□□□□□ -0.15
Lsm3P62311 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Lsm3P62311 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Lsm3P62311 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Lsm3P62311 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.1□□□□□ -0.15
Lsm3P62311 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Lsm3P62311 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.1□□□□□ -0.15
Lsm3P62311 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.1□□□□□ -0.15
Lsm3P62311 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.1□□□□□ -0.15
Lsm3P62311 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Lsm3P62311 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.1□□□□□ -0.15
Lsm3P62311 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Lsm3P62311 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Lsm3P62311 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.09□□□□□ -0.15
Lsm3P62311 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms