Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC12.42□□□□□ -0.42
Lmo4P61969 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Lmo4P61969 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.42□□□□□ -0.42
Lmo4P61969 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.42□□□□□ -0.42
Lmo4P61969 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.42□□□□□ -0.42
Lmo4P61969 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Gm43474-201ENSMUST00000196415 774 ntBASIC12.42□□□□□ -0.42
Lmo4P61969 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lmo4P61969 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Lmo4P61969 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Lmo4P61969 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Lmo4P61969 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Lmo4P61969 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.41□□□□□ -0.42
Lmo4P61969 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.41□□□□□ -0.42
Lmo4P61969 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.41□□□□□ -0.42
Lmo4P61969 Gm18057-201ENSMUST00000208220 503 ntBASIC12.41□□□□□ -0.42
Lmo4P61969 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Lmo4P61969 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.41□□□□□ -0.42
Lmo4P61969 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.41□□□□□ -0.42
Lmo4P61969 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Lmo4P61969 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lmo4P61969 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lmo4P61969 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Gm13616-201ENSMUST00000120600 222 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.4□□□□□ -0.42
Lmo4P61969 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Mir6956-201ENSMUST00000183598 62 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Gm43125-201ENSMUST00000201724 730 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.4□□□□□ -0.42
Lmo4P61969 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.4□□□□□ -0.42
Lmo4P61969 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lmo4P61969 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lmo4P61969 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Lmo4P61969 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Lmo4P61969 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms