Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vbp1P61759 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.03□□□□□ -0.16
Vbp1P61759 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Gm38027-201ENSMUST00000192315 235 ntBASIC14.03□□□□□ -0.16
Vbp1P61759 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.03□□□□□ -0.16
Vbp1P61759 Gm7791-201ENSMUST00000219066 539 ntBASIC14.03□□□□□ -0.16
Vbp1P61759 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.03□□□□□ -0.16
Vbp1P61759 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vbp1P61759 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.03□□□□□ -0.16
Vbp1P61759 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.03□□□□□ -0.16
Vbp1P61759 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vbp1P61759 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vbp1P61759 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vbp1P61759 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vbp1P61759 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vbp1P61759 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vbp1P61759 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vbp1P61759 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.02□□□□□ -0.16
Vbp1P61759 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Vbp1P61759 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vbp1P61759 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vbp1P61759 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.02□□□□□ -0.17
Vbp1P61759 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vbp1P61759 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.02□□□□□ -0.17
Vbp1P61759 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vbp1P61759 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vbp1P61759 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Vbp1P61759 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vbp1P61759 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vbp1P61759 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vbp1P61759 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Vbp1P61759 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Gm26571-201ENSMUST00000181399 666 ntBASIC14.01□□□□□ -0.17
Vbp1P61759 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vbp1P61759 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vbp1P61759 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vbp1P61759 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Vbp1P61759 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vbp1P61759 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vbp1P61759 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vbp1P61759 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms