Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sf3b6P59708 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sf3b6P59708 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
Sf3b6P59708 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Sf3b6P59708 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sf3b6P59708 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.7□□□□□ -0.22
Sf3b6P59708 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sf3b6P59708 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm6659-201ENSMUST00000174752 547 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm21559-201ENSMUST00000220638 855 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm8587-201ENSMUST00000076538 843 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.7□□□□□ -0.22
Sf3b6P59708 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Sf3b6P59708 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sf3b6P59708 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.69□□□□□ -0.22
Sf3b6P59708 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sf3b6P59708 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sf3b6P59708 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Gm25016-201ENSMUST00000158399 131 ntBASIC13.68□□□□□ -0.22
Sf3b6P59708 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms