Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp25P57080 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp25P57080 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp25P57080 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.48■□□□□ 0.39
Usp25P57080 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp25P57080 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp25P57080 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp25P57080 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp25P57080 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Usp25P57080 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp25P57080 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp25P57080 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Usp25P57080 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp25P57080 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp25P57080 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.47■□□□□ 0.39
Usp25P57080 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp25P57080 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp25P57080 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp25P57080 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp25P57080 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Usp25P57080 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.46■□□□□ 0.39
Usp25P57080 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Usp25P57080 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp25P57080 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp25P57080 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Usp25P57080 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Usp25P57080 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp25P57080 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.45■□□□□ 0.38
Usp25P57080 Gm21559-201ENSMUST00000220638 855 ntBASIC17.45■□□□□ 0.38
Usp25P57080 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.45■□□□□ 0.38
Usp25P57080 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Gm8587-201ENSMUST00000076538 843 ntBASIC17.45■□□□□ 0.38
Usp25P57080 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Usp25P57080 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp25P57080 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms