Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab4aP56371 Gm6211-202ENSMUST00000167849 925 ntBASIC12.21□□□□□ -0.45
Rab4aP56371 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rab4aP56371 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.21□□□□□ -0.45
Rab4aP56371 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab4aP56371 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab4aP56371 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.21□□□□□ -0.45
Rab4aP56371 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab4aP56371 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rab4aP56371 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Rab4aP56371 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rab4aP56371 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.21□□□□□ -0.46
Rab4aP56371 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.21□□□□□ -0.46
Rab4aP56371 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab4aP56371 BC037039-201ENSMUST00000192003 2205 ntBASIC12.21□□□□□ -0.46
Rab4aP56371 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Rab4aP56371 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rab4aP56371 Gm7290-201ENSMUST00000104990 617 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Gm12918-201ENSMUST00000120234 636 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Gm15710-201ENSMUST00000121821 636 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.2□□□□□ -0.46
Rab4aP56371 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rab4aP56371 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.2□□□□□ -0.46
Rab4aP56371 Gm5075-201ENSMUST00000196916 622 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rab4aP56371 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.2□□□□□ -0.46
Rab4aP56371 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 App-207ENSMUST00000227737 2827 ntBASIC12.2□□□□□ -0.46
Rab4aP56371 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rab4aP56371 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rab4aP56371 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rab4aP56371 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.2□□□□□ -0.46
Rab4aP56371 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.2□□□□□ -0.46
Rab4aP56371 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab4aP56371 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.19□□□□□ -0.46
Rab4aP56371 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Rab4aP56371 Gm10138-203ENSMUST00000206952 366 ntBASIC12.19□□□□□ -0.46
Rab4aP56371 Gm18671-201ENSMUST00000214826 683 ntBASIC12.19□□□□□ -0.46
Rab4aP56371 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rab4aP56371 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab4aP56371 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms