Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.58□□□□□ -0.08
Nkx2-6P43688 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-6P43688 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.57□□□□□ -0.08
Nkx2-6P43688 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.57□□□□□ -0.08
Nkx2-6P43688 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.57□□□□□ -0.08
Nkx2-6P43688 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-6P43688 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Nkx2-6P43688 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gm13597-201ENSMUST00000121239 375 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.55□□□□□ -0.08
Nkx2-6P43688 Gm45612-201ENSMUST00000211320 160 ntBASIC14.55□□□□□ -0.08
Nkx2-6P43688 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms