Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sdc2P43407 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.32■□□□□ 0.36
Sdc2P43407 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sdc2P43407 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sdc2P43407 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Sdc2P43407 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sdc2P43407 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sdc2P43407 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Sdc2P43407 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.31■□□□□ 0.36
Sdc2P43407 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.31■□□□□ 0.36
Sdc2P43407 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.31■□□□□ 0.36
Sdc2P43407 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Sdc2P43407 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sdc2P43407 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Sdc2P43407 Gm15165-201ENSMUST00000118140 502 ntBASIC17.3■□□□□ 0.36
Sdc2P43407 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Gm25745-201ENSMUST00000174945 133 ntBASIC17.3■□□□□ 0.36
Sdc2P43407 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Gm27704-201ENSMUST00000185094 107 ntBASIC17.3■□□□□ 0.36
Sdc2P43407 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.3■□□□□ 0.36
Sdc2P43407 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.3■□□□□ 0.36
Sdc2P43407 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.3■□□□□ 0.36
Sdc2P43407 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Sdc2P43407 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sdc2P43407 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sdc2P43407 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.29■□□□□ 0.36
Sdc2P43407 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Sdc2P43407 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.29■□□□□ 0.36
Sdc2P43407 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.29■□□□□ 0.36
Sdc2P43407 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.29■□□□□ 0.36
Sdc2P43407 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sdc2P43407 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sdc2P43407 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sdc2P43407 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms