Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gdf6P43028 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.17■□□□□ 0.18
Gdf6P43028 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Gdf6P43028 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.17■□□□□ 0.18
Gdf6P43028 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gdf6P43028 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gdf6P43028 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gdf6P43028 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Gdf6P43028 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.16■□□□□ 0.18
Gdf6P43028 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gdf6P43028 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.16■□□□□ 0.18
Gdf6P43028 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Gdf6P43028 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gdf6P43028 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gdf6P43028 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gdf6P43028 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.15■□□□□ 0.18
Gdf6P43028 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gdf6P43028 Gm9385-201ENSMUST00000117563 472 ntBASIC16.15■□□□□ 0.18
Gdf6P43028 Gm16198-201ENSMUST00000118766 670 ntBASIC16.15■□□□□ 0.18
Gdf6P43028 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gdf6P43028 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gdf6P43028 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gdf6P43028 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gdf6P43028 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Gdf6P43028 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gdf6P43028 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.14■□□□□ 0.17
Gdf6P43028 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.14■□□□□ 0.17
Gdf6P43028 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Gdf6P43028 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gdf6P43028 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Gdf6P43028 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Gdf6P43028 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.13■□□□□ 0.17
Gdf6P43028 Gm27494-201ENSMUST00000184735 189 ntBASIC16.13■□□□□ 0.17
Gdf6P43028 Gm20553-201ENSMUST00000204205 844 ntBASIC16.13■□□□□ 0.17
Gdf6P43028 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Gdf6P43028 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Gdf6P43028 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Gdf6P43028 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Gdf6P43028 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms