Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk2P38575 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Upk2P38575 Gm27646-201ENSMUST00000183989 110 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.53□□□□□ -0.24
Upk2P38575 Gm43347-201ENSMUST00000200226 580 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Gm34391-201ENSMUST00000203706 907 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.53□□□□□ -0.24
Upk2P38575 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.53□□□□□ -0.24
Upk2P38575 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Gm6296-201ENSMUST00000222599 943 ntBASIC13.53□□□□□ -0.24
Upk2P38575 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Upk2P38575 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Upk2P38575 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Upk2P38575 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Upk2P38575 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Upk2P38575 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.53□□□□□ -0.24
Upk2P38575 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Upk2P38575 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Upk2P38575 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Upk2P38575 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.52□□□□□ -0.25
Upk2P38575 Gm27459-201ENSMUST00000184860 107 ntBASIC13.52□□□□□ -0.25
Upk2P38575 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.52□□□□□ -0.25
Upk2P38575 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.52□□□□□ -0.25
Upk2P38575 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk2P38575 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Upk2P38575 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Upk2P38575 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.52□□□□□ -0.25
Upk2P38575 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Upk2P38575 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk2P38575 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk2P38575 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk2P38575 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.51□□□□□ -0.25
Upk2P38575 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.51□□□□□ -0.25
Upk2P38575 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.51□□□□□ -0.25
Upk2P38575 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Upk2P38575 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk2P38575 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk2P38575 Gm8318-201ENSMUST00000182954 872 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44357-201ENSMUST00000195897 142 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm19658-201ENSMUST00000196231 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44367-201ENSMUST00000196836 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44350-201ENSMUST00000197197 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44390-201ENSMUST00000197533 144 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44313-201ENSMUST00000198018 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44486-201ENSMUST00000198508 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44314-201ENSMUST00000199263 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44394-201ENSMUST00000199558 138 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms