Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Foxa3P35584 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Foxa3P35584 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.9□□□□□ -0.34
Foxa3P35584 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Foxa3P35584 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Foxa3P35584 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Foxa3P35584 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Foxa3P35584 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.9□□□□□ -0.35
Foxa3P35584 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.9□□□□□ -0.35
Foxa3P35584 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Foxa3P35584 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.89□□□□□ -0.35
Foxa3P35584 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Foxa3P35584 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.89□□□□□ -0.35
Foxa3P35584 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.89□□□□□ -0.35
Foxa3P35584 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.89□□□□□ -0.35
Foxa3P35584 Timm23-208ENSMUST00000226683 750 ntBASIC12.89□□□□□ -0.35
Foxa3P35584 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.89□□□□□ -0.35
Foxa3P35584 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Foxa3P35584 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.89□□□□□ -0.35
Foxa3P35584 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Foxa3P35584 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Foxa3P35584 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Foxa3P35584 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.88□□□□□ -0.35
Foxa3P35584 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Foxa3P35584 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.88□□□□□ -0.35
Foxa3P35584 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.88□□□□□ -0.35
Foxa3P35584 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Foxa3P35584 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.88□□□□□ -0.35
Foxa3P35584 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.88□□□□□ -0.35
Foxa3P35584 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Foxa3P35584 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms