Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Rab5cP35278 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rab5cP35278 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Rab5cP35278 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Rab5cP35278 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rab5cP35278 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rab5cP35278 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Rab5cP35278 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.6□□□□□ -0.39
Rab5cP35278 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Rab5cP35278 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab5cP35278 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rab5cP35278 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.6□□□□□ -0.39
Rab5cP35278 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.6□□□□□ -0.39
Rab5cP35278 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rab5cP35278 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rab5cP35278 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.59□□□□□ -0.39
Rab5cP35278 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rab5cP35278 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rab5cP35278 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rab5cP35278 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab5cP35278 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rab5cP35278 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.59□□□□□ -0.39
Rab5cP35278 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.59□□□□□ -0.39
Rab5cP35278 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.59□□□□□ -0.39
Rab5cP35278 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rab5cP35278 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.59□□□□□ -0.39
Rab5cP35278 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rab5cP35278 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.59□□□□□ -0.39
Rab5cP35278 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.59□□□□□ -0.39
Rab5cP35278 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rab5cP35278 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rab5cP35278 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Rab5cP35278 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rab5cP35278 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rab5cP35278 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms