Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Nckap1P28660 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.33■□□□□ 0.04
Nckap1P28660 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.33■□□□□ 0.04
Nckap1P28660 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Gm11025-201ENSMUST00000140773 466 ntBASIC15.33■□□□□ 0.04
Nckap1P28660 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.33■□□□□ 0.04
Nckap1P28660 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.33■□□□□ 0.04
Nckap1P28660 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.33■□□□□ 0.04
Nckap1P28660 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nckap1P28660 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.32■□□□□ 0.04
Nckap1P28660 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Nckap1P28660 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1P28660 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.32■□□□□ 0.04
Nckap1P28660 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1P28660 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.32■□□□□ 0.04
Nckap1P28660 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nckap1P28660 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.32■□□□□ 0.04
Nckap1P28660 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Nckap1P28660 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nckap1P28660 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nckap1P28660 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Nckap1P28660 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.31■□□□□ 0.04
Nckap1P28660 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.31■□□□□ 0.04
Nckap1P28660 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.31■□□□□ 0.04
Nckap1P28660 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nckap1P28660 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nckap1P28660 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms