Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdh3P10287 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdh3P10287 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.31□□□□□ -0.12
Cdh3P10287 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.31□□□□□ -0.12
Cdh3P10287 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh3P10287 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdh3P10287 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Cdh3P10287 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cdh3P10287 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.3□□□□□ -0.12
Cdh3P10287 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdh3P10287 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh3P10287 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Cdh3P10287 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdh3P10287 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Cdh3P10287 Gm27742-201ENSMUST00000184667 60 ntBASIC14.29□□□□□ -0.12
Cdh3P10287 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.29□□□□□ -0.12
Cdh3P10287 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 App-207ENSMUST00000227737 2827 ntBASIC14.29□□□□□ -0.12
Cdh3P10287 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh3P10287 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Cdh3P10287 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdh3P10287 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdh3P10287 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cdh3P10287 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh3P10287 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Gm15794-201ENSMUST00000120182 631 ntBASIC14.28□□□□□ -0.12
Cdh3P10287 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.28□□□□□ -0.12
Cdh3P10287 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Cdh3P10287 Gm44430-201ENSMUST00000203376 995 ntBASIC14.28□□□□□ -0.12
Cdh3P10287 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdh3P10287 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Cdh3P10287 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdh3P10287 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms