Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Hoxc9P09633 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxc9P09633 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Hoxc9P09633 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hoxc9P09633 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm11543-201ENSMUST00000120758 370 ntBASIC19.89■□□□□ 0.77
Hoxc9P09633 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.89■□□□□ 0.77
Hoxc9P09633 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxc9P09633 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxc9P09633 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Gm6415-201ENSMUST00000118488 348 ntBASIC19.88■□□□□ 0.77
Hoxc9P09633 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Gm18737-201ENSMUST00000173594 937 ntBASIC19.88■□□□□ 0.77
Hoxc9P09633 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.88■□□□□ 0.77
Hoxc9P09633 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.88■□□□□ 0.77
Hoxc9P09633 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxc9P09633 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hoxc9P09633 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxc9P09633 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Gm29541-201ENSMUST00000191351 678 ntBASIC19.87■□□□□ 0.77
Hoxc9P09633 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.87■□□□□ 0.77
Hoxc9P09633 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Hoxc9P09633 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Hoxc9P09633 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hoxc9P09633 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm13015-201ENSMUST00000118674 204 ntBASIC19.86■□□□□ 0.77
Hoxc9P09633 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC19.86■□□□□ 0.77
Hoxc9P09633 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm8597-201ENSMUST00000191525 1109 ntBASIC19.86■□□□□ 0.77
Hoxc9P09633 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms