Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Tuba1bP05213 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Tuba1bP05213 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.37□□□□□ -0.11
Tuba1bP05213 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tuba1bP05213 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.37□□□□□ -0.11
Tuba1bP05213 Gm11950-201ENSMUST00000121615 838 ntBASIC14.37□□□□□ -0.11
Tuba1bP05213 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Gm33142-201ENSMUST00000193913 867 ntBASIC14.37□□□□□ -0.11
Tuba1bP05213 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Tuba1bP05213 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Tuba1bP05213 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Gm7284-201ENSMUST00000131667 944 ntBASIC14.36□□□□□ -0.11
Tuba1bP05213 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Tuba1bP05213 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Tuba1bP05213 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.35□□□□□ -0.11
Tuba1bP05213 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.35□□□□□ -0.11
Tuba1bP05213 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Tuba1bP05213 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms