Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P04224 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.57□□□□□ -0.24
P04224 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P04224 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.56□□□□□ -0.24
P04224 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.56□□□□□ -0.24
P04224 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
P04224 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.56□□□□□ -0.24
P04224 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.56□□□□□ -0.24
P04224 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.56□□□□□ -0.24
P04224 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.56□□□□□ -0.24
P04224 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P04224 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P04224 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.55□□□□□ -0.24
P04224 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Gm11539-201ENSMUST00000119837 557 ntBASIC13.55□□□□□ -0.24
P04224 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.55□□□□□ -0.24
P04224 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.55□□□□□ -0.24
P04224 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P04224 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P04224 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.55□□□□□ -0.24
P04224 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P04224 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.54□□□□□ -0.24
P04224 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
P04224 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.54□□□□□ -0.24
P04224 Gm21814-202ENSMUST00000203277 873 ntBASIC13.54□□□□□ -0.24
P04224 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.54□□□□□ -0.24
P04224 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.54□□□□□ -0.24
P04224 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
P04224 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms