Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Mir5131-201ENSMUST00000175426 93 ntBASIC14.1□□□□□ -0.15
P01852 Gm27646-201ENSMUST00000183989 110 ntBASIC14.1□□□□□ -0.15
P01852 Gm2651-201ENSMUST00000203560 838 ntBASIC14.1□□□□□ -0.15
P01852 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.1□□□□□ -0.15
P01852 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.1□□□□□ -0.15
P01852 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
P01852 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
P01852 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.09□□□□□ -0.15
P01852 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
P01852 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.09□□□□□ -0.15
P01852 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
P01852 Gm6550-201ENSMUST00000187574 993 ntBASIC14.09□□□□□ -0.15
P01852 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.09□□□□□ -0.15
P01852 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
P01852 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.09□□□□□ -0.15
P01852 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
P01852 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.09□□□□□ -0.15
P01852 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.09□□□□□ -0.15
P01852 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
P01852 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.09□□□□□ -0.15
P01852 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
P01852 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
P01852 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.08□□□□□ -0.16
P01852 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.08□□□□□ -0.16
P01852 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Gm15358-201ENSMUST00000119249 520 ntBASIC14.08□□□□□ -0.16
P01852 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.08□□□□□ -0.16
P01852 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.08□□□□□ -0.16
P01852 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.08□□□□□ -0.16
P01852 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.08□□□□□ -0.16
P01852 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
P01852 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
P01852 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms