Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.21□□□□□ -0.29
Cldn1O88551 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cldn1O88551 Gm13365-201ENSMUST00000121188 973 ntBASIC13.21□□□□□ -0.29
Cldn1O88551 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.21□□□□□ -0.29
Cldn1O88551 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cldn1O88551 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cldn1O88551 Mir6404-201ENSMUST00000183699 94 ntBASIC13.21□□□□□ -0.29
Cldn1O88551 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.21□□□□□ -0.29
Cldn1O88551 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.21□□□□□ -0.29
Cldn1O88551 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Cldn1O88551 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.21□□□□□ -0.3
Cldn1O88551 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cldn1O88551 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.2□□□□□ -0.3
Cldn1O88551 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cldn1O88551 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cldn1O88551 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.2□□□□□ -0.3
Cldn1O88551 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.2□□□□□ -0.3
Cldn1O88551 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Mir7023-201ENSMUST00000185093 64 ntBASIC13.2□□□□□ -0.3
Cldn1O88551 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.2□□□□□ -0.3
Cldn1O88551 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cldn1O88551 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cldn1O88551 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cldn1O88551 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.2□□□□□ -0.3
Cldn1O88551 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cldn1O88551 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.19□□□□□ -0.3
Cldn1O88551 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cldn1O88551 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.19□□□□□ -0.3
Cldn1O88551 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Cldn1O88551 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cldn1O88551 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cldn1O88551 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cldn1O88551 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms