Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm7367-201ENSMUST00000057611 492 ntBASIC14.73□□□□□ -0.05
Vti1bO88384 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.73□□□□□ -0.05
Vti1bO88384 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.73□□□□□ -0.05
Vti1bO88384 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vti1bO88384 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.72□□□□□ -0.05
Vti1bO88384 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.72□□□□□ -0.05
Vti1bO88384 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vti1bO88384 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Vti1bO88384 Gm13312-201ENSMUST00000119631 718 ntBASIC14.72□□□□□ -0.05
Vti1bO88384 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.72□□□□□ -0.05
Vti1bO88384 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.72□□□□□ -0.05
Vti1bO88384 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.72□□□□□ -0.05
Vti1bO88384 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vti1bO88384 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.72□□□□□ -0.05
Vti1bO88384 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vti1bO88384 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Vti1bO88384 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Vti1bO88384 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.71□□□□□ -0.05
Vti1bO88384 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.71□□□□□ -0.05
Vti1bO88384 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vti1bO88384 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vti1bO88384 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.71□□□□□ -0.05
Vti1bO88384 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.71□□□□□ -0.05
Vti1bO88384 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.71□□□□□ -0.05
Vti1bO88384 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.71□□□□□ -0.05
Vti1bO88384 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vti1bO88384 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vti1bO88384 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.71□□□□□ -0.05
Vti1bO88384 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1bO88384 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Vti1bO88384 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1bO88384 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vti1bO88384 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Vti1bO88384 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Vti1bO88384 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.7□□□□□ -0.06
Vti1bO88384 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vti1bO88384 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Vti1bO88384 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.7□□□□□ -0.06
Vti1bO88384 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.7□□□□□ -0.06
Vti1bO88384 Gm27357-201ENSMUST00000183754 135 ntBASIC14.7□□□□□ -0.06
Vti1bO88384 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.7□□□□□ -0.06
Vti1bO88384 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.7□□□□□ -0.06
Vti1bO88384 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vti1bO88384 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vti1bO88384 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms