Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.87■□□□□ 0.77
Nid2O88322 Gm9719-201ENSMUST00000162765 543 ntBASIC19.87■□□□□ 0.77
Nid2O88322 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nid2O88322 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nid2O88322 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.87■□□□□ 0.77
Nid2O88322 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nid2O88322 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nid2O88322 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC19.86■□□□□ 0.77
Nid2O88322 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.86■□□□□ 0.77
Nid2O88322 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.86■□□□□ 0.77
Nid2O88322 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nid2O88322 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nid2O88322 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.85■□□□□ 0.77
Nid2O88322 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nid2O88322 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Gm24543-201ENSMUST00000103867 82 ntBASIC19.85■□□□□ 0.77
Nid2O88322 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Nid2O88322 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Nid2O88322 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.85■□□□□ 0.77
Nid2O88322 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nid2O88322 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nid2O88322 Gm12859-201ENSMUST00000117834 427 ntBASIC19.84■□□□□ 0.77
Nid2O88322 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC19.84■□□□□ 0.77
Nid2O88322 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Nid2O88322 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.84■□□□□ 0.77
Nid2O88322 AC132467.2-202ENSMUST00000227726 559 ntBASIC19.84■□□□□ 0.77
Nid2O88322 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nid2O88322 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Nid2O88322 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Nid2O88322 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nid2O88322 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid2O88322 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid2O88322 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid2O88322 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.83■□□□□ 0.76
Nid2O88322 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid2O88322 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nid2O88322 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid2O88322 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nid2O88322 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nid2O88322 Asic1-205ENSMUST00000228185 1818 ntBASIC19.82■□□□□ 0.76
Nid2O88322 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms